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| KbaseKit-package | Basic Toolkit for the Kbase MG-RAST Server |
| .kbCallRaw | Call the MG-RAST API Directly |
| .kbCallRaw | Calling the MG-RAST API Directly |
| .kbGetAuth | Get and Set MG-RAST Authorization Key |
| .kbSetAuth | Get and Set MG-RAST Authorization Key |
| Analysis Tools | Dendogram analysis |
| Analysis Tools | mgrastPlotPCO |
| Authorization | Get and Set MG-RAST Authorization Key |
| BIOM | Import and Export BIOM Objects |
| BIOM Import and Export | Import and Export BIOM Objects |
| Data Retrieval from MG-RAST | Retrieve Resources from the Kbase MG-RAST Server |
| Direct API Calls | Calling the MG-RAST API Directly |
| fromBIOM | Import and Export BIOM Objects |
| Import and Export | Import and Export BIOM Objects |
| kbAnnotationLookup | Look Up Annotations in Specified Source Database |
| Kbase | Basic Toolkit for the Kbase MG-RAST Server |
| kbase | Basic Toolkit for the Kbase MG-RAST Server |
| Kbase Authorization | Get and Set MG-RAST Authorization Key |
| KbaseKit | Basic Toolkit for the Kbase MG-RAST Server |
| kbGet | Retrieve Resources from the Kbase MG-RAST Server |
| kbListAll | List MG-RAST ID's of All Resources of One Type |
| kbSearchMetagenomes | Search Metagenomes in MG-RAST on Any Criteria |
| MG-RAST | Basic Toolkit for the Kbase MG-RAST Server |
| MGRAST | Basic Toolkit for the Kbase MG-RAST Server |
| mgrast | Basic Toolkit for the Kbase MG-RAST Server |
| mgrastDoStats | Does stats |
| mgrastPlotPCA | Visualize Principal Component Analysis |
| mgrastPlotPCO | mgrastPlotPCO |
| mgrastPreprocessing | Does preprocessing |
| mgrastSuggestTest | Suggests stats test |
| sample_matrix | Calculate permutations and derived stats abundance count data |
| toBIOM | Import and Export BIOM Objects |